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Calculate index of total biomass per stratum

Usage

calc_biomass_stratum(racebase_tables = NULL, cpue = NULL)

Arguments

racebase_tables

data object created from gapindex::get_data()

cpue

object created from gapindex::calc_cpue().

Value

FieldDescription
YEARYear the survey was conducted in.
BIOMASS_MTThe estimated biomass caught in the survey for a species, group, or total for a given survey.
BIOMASS_VARThe estimated biomass variance caught in the survey for a species, group, or total for a given survey.
N_WEIGHTTotal number of hauls with positive catch/weighed taxon data used in calculation.
N_COUNTTotal number of hauls with positive taxon counts used in calculation.
N_HAULTotal number of valid hauls used in calculation.
N_LENGTHTotal number of hauls with taxon length data used in calculation.
CPUE_KGKM2_MEANThe mean of catch weight (kilograms) divided by area (squared kilometers) swept by the net used in design-based indicie calculation.
CPUE_KGKM2_VARThe variance of mean of catch weight (kilograms) divided by area (squared kilometers) swept by the net used in design-based indicie calculation.
CPUE_NOKM2_MEANThe mean of catch count (number) divided by area (squared kilometers) swept by the net used in design-based indicie calculation.
CPUE_NOKM2_VARThe variance of mMean of catch count (number) divided by area (squared kilometers) swept by the net used in design-based indicie calculation.
POPULATION_COUNTThe estimated population caught in the survey for a species, group, or total for a given survey.
POPULATION_VARThe estimated population variance caught in the survey for a species, group, or total for a given survey.
SPECIES_CODEThe species code of the organism associated with the 'common_name' and 'scientific_name' columns. For a complete species list, review the code books.
STRATUMRACE database statistical area for analyzing data. Strata were designed using bathymetry and other geographic and habitat-related elements. The strata are unique to each survey series. Stratum of value 0 indicates experimental tows.
SURVEYName and description of survey. The column 'survey' is associated with the 'srvy' and 'survey_id' columns.
SURVEY_DEFINITION_IDThis number uniquely identifies a survey. Name and description of survey. The column 'survey_id' is associated with the 'srvy' and 'survey' columns. For a complete list of surveys, review the code books.